Publications

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Staphylococcus aureus Tetracycline Resistance and Co-resistance in a Doxy-PEP-Eligible Population.

J Infect Dis
Mittelstaedt R, Kanjilal S, Helekal D, Robbins GK, Grad YH

Testing and Masking Policies and Hospital-Onset Respiratory Viral Infections.

JAMA Netw Open
Pak TR, Chen T, Kanjilal S, McKenna CS, Rhee C, Klompas M

Case 29-2024: A 47-Year-Old Man with Confusion and Kidney Failure.

N Engl J Med
Shah SJ, Price MC, Kanjilal S

Tetracycline Resistance and Co-resistance in a Doxy-PEP-Eligible Population.

medRxiv
Mittelstaedt R, Kanjilal S, Helekal D, Robbins GK, Grad YH

Reassessing the management of uncomplicated urinary tract infection: A retrospective analysis using machine learning causal inference.

medRxiv
Jones NC, Shih MC, Healey E, Zhai CW, Advani SD, Smith-McLallen A, Sontag D, Kanjilal S

Morbidity and Mortality of Hospital-Onset SARS-CoV-2 Infections Due to Omicron Versus Prior Variants : A Propensity-Matched Analysis.

Ann Intern Med
Klompas M, McKenna CS, Kanjilal S, Pak T, Rhee C, Chen T

Socioeconomic Disparities and the Prevalence of Antimicrobial Resistance.

Clin Infect Dis
Cooper LN, Beauchamp AM, Ingle TA, Diaz MI, Wakene AD, Katterpalli C, Keller T, Walker C, Blumberg S, Kanjilal S, Chen JH, Radunsky AP, Most ZM, Hanna JJ, Perl TM, Lehmann CU, Medford RJ

The modern alchemy of clinical pathology: turning the output of microbiology laboratory operations into gold.

J Clin Microbiol
Kanjilal S

Cycle threshold dynamics of non-severe acute respiratory coronavirus virus 2 (SARS-CoV-2) respiratory viruses.

Infect Control Hosp Epidemiol
Ehrenzeller S, Zaffini R, Pecora ND, Kanjilal S, Rhee C, Klompas M

Flying Into the Future With Large Language Models.

Clin Infect Dis
Kanjilal S

Use of Electronic Clinical Data to Track Incidence and Mortality for SARS-CoV-2-Associated Sepsis.

JAMA Netw Open
Shappell CN, Klompas M, Chan C, Chen T, Kanjilal S, McKenna C, Rhee C,

The diagnostic and clinical utility of microbial cell-free DNA sequencing in a real-world setting.

Diagn Microbiol Infect Dis
Weiss ZF, Pyden AD, Jhaveri TA, Kanjilal S

Viral Lineages in the 2022 RSV Surge in the United States.

N Engl J Med
Adams G, Moreno GK, Petros BA, Uddin R, Levine Z, Kotzen B, Messer KS, Dobbins ST, DeRuff KC, Loreth CM, Brock-Fisher T, Schaffner SF, Chaluvadi S, Kanjilal S, Luban J, Ozonoff A, Park DJ, Turbett SE, Siddle KJ, MacInnis BL, Sabeti PC, Lemieux JE

Predictors of low spike antibody response in patients with systemic rheumatic disease after an initial course of COVID-19 vaccination.

Clin Rheumatol
Whelan MG, Santacroce L, Masto L, Qian G, Kowalski E, Vanni K, Kanjilal S, Weinblatt ME, Sparks JA, Tedeschi SK

The 2022 RSV surge was driven by multiple viral lineages.

medRxiv
Adams G, Moreno GK, Petros BA, Uddin R, Levine Z, Kotzen B, Messer K, Dobbins ST, DeRuff KC, Loreth C, Brock-Fisher T, Schaffner SF, Chaluvadi S, Kanjilal S, Luban J, Ozonoff A, Park D, Turbett S, Siddle KJ, MacInnis BL, Sabeti P, Lemieux J

Hidden in plain sight: urinary Cryptococcus neoformans missed by routine diagnostics in a patient with acute leukemia.

Ann Clin Microbiol Antimicrob
Weiss ZF, DiCarlo JE, Basta DW, Kent S, Liakos A, Baden L, Brigl M, Kanjilal S, Cañete-Gibas C, Wiederhold NP, Basu SS

Prevalence, Clinical Characteristics, and Outcomes of Sepsis Caused by Severe Acute Respiratory Syndrome Coronavirus 2 Versus Other Pathogens in Hospitalized Patients With COVID-19.

Crit Care Explor
Shappell CN, Klompas M, Kanjilal S, Chan C, Rhee C

A Tale of Trial and Triumph: Molecular Diagnostics for Severe Acute Respiratory Coronavirus 2 Over the First Two Years of the Coronavirus Disease 2019 Pandemic.

Clin Lab Med
Kanjilal S, Tang YW

Inter-species geographic signatures for tracing horizontal gene transfer and long-term persistence of carbapenem resistance.

Genome Med
Salamzade R, Manson AL, Walker BJ, Brennan-Krohn T, Worby CJ, Ma P, He LL, Shea TP, Qu J, Chapman SB, Howe W, Young SK, Wurster JI, Delaney ML, Kanjilal S, Onderdonk AB, Bittencourt CE, Gussin GM, Kim D, Peterson EM, Ferraro MJ, Hooper DC, Shenoy ES, Cuomo CA, Cosimi LA, Huang SS, Kirby JE, Pierce VM, Bhattacharyya RP, Earl AM

The Effect of Vaccine Type and SARS-CoV-2 Lineage on Commercial SARS-CoV-2 Serologic and Pseudotype Neutralization Assays in mRNA Vaccine Recipients.

Microbiol Spectr
Tolan NV, Sherman AC, Zhou G, Nabel KG, Desjardins M, Melanson S, Kanjilal S, Moheed S, Kupelian J, Kaufman RM, Ryan ET, LaRocque RC, Branda JA, Dighe AS, Abraham J, Baden LR, Charles RC, Turbett SE